FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001721797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12088587
Sequences flagged as poor quality0
Sequence length30-51
%GC25

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA300800.24882974329423282No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG204460.16913473841070092No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA192270.15905084688557894No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG135000.11167558292793028No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA128830.10657159517485376No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)