FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001721803

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721803
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26511519
Sequences flagged as poor quality0
Sequence length30-51
%GC28

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1085440.40942203273980643No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA819760.30920898949622616No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA806960.304380899487502No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA432110.16298952919295193No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG395800.14929359573851653No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG337900.12745403233967847No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG308810.116481443405789No Hit
AATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG273590.10319665199115902No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)