FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26511282
Sequences flagged as poor quality0
Sequence length30-51
%GC28

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1298680.48985937383186523No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA976250.3682394536786263No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA930210.3508732621832471No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA478130.18034963378987104No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG457330.17250391738883092No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG379660.14320695619321616No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG371070.13996682619874815No Hit
AATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG337690.12737596016669434No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACAA309500.11674275125586155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)