FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721809

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721809
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27015615
Sequences flagged as poor quality0
Sequence length30-51
%GC27

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG2401210.888823001068086No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA1451070.5371226973733524No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA1209420.44767442828897286No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA551950.20430776793347108No Hit
AATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG401500.14861775310315906No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG392940.14544921520387377No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACAA363830.13467396540852394No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG362610.13422237472661644No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA342790.1268858769271031No Hit
ATTAATTCCATTCCATTCCATTCCATTCCATTCCCTTCCATTCCATTCC282440.10454694442454855No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG272980.10104526585828233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)