FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001721821

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721821
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21057584
Sequences flagged as poor quality0
Sequence length30-51
%GC27

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG866970.4117138984225351No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA637010.3025085878797872No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA421690.20025564186280817No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG406030.19281889128401436No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA364060.1728878298669021No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA240170.11405391995586958No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA234510.11136605224986873No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)