FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001721842

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721842
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18196114
Sequences flagged as poor quality0
Sequence length30-51
%GC33

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAGG936270.514543929544517No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATAA718630.39493597369196526No Hit
TGGGTTTTGTTATTTTAATAAATTTTGTTTTTGGGTGGGTGTGGGTATAAT633650.34823369429318807No Hit
TGGTGGGGATAGTGATGATTATGGTAGTGGAGGTGAAATATGTTTGTGTGT351750.193310505748645No Hit
TGGAGTAATTTAGGTTGGTTTTTATTTATTTTAAATTTTTTTTTGTATGAA330980.18189598064729645No Hit
TGGAAAAAAAGAATTATTTGGATATATAGGTATGGTTTGAGTTATGATATT323490.1777797171418029No Hit
TGGAGGAGGAGATTTTATTTTATATTAATATTTATTTTGATTTTTTGGTTA302150.1660519383424395No Hit
TGGATAATGAATTATAATTAATATTATTAATTAATATTTATTATTAATAAT252750.13890328451448478No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)