FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74304261
Sequences flagged as poor quality0
Sequence length30-51
%GC27

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA4011140.5398263768480249No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG3114610.41916977008895895No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA2403390.32345251371250433No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG2047620.275572352438846No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA1496150.2013545360474011No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA1320340.17769371261225517No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA1087750.14639133548478464No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACAA1019390.13719132473439175No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACTATATTAACCA991000.13337054788822944No Hit
ACTAATTTTTTATATTTTTAATAAAAATAAAATTTCACCGTATTAACCA927170.12478019261910163No Hit
ACTAATTTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACC916710.12337246715905027No Hit
ACTAATTTTTTATATTTTTAATAAAAACAAAATTTCACCGTATTAACCA900860.12123934588354225No Hit
ACTAATTTTTATATTTTTAATAAAAATAAAATTTCACCATATTAACCAA896690.12067813984449693No Hit
ACTAATTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCAA875860.11787480128494919No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG862280.11604718065899343No Hit
ACTAATTTTTATATTTTTAATAAAAACAAAATTTCACCATATTAACCAA824780.11100036376110382No Hit
ACTAATTTTTTATATTTTTAATAAAAACAAAATTTCACCATATTAACCA754540.10154733925689671No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)