FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21759197
Sequences flagged as poor quality0
Sequence length30-51
%GC26

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1328460.6105280447619459No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA1040200.4780507295374917No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA589250.2708050301672438No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG459640.2112394129250266No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA412650.18964394687910588No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA388930.17874280930495734No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG297850.13688464698398567No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACTATATTAACCA257240.11822127443397842No Hit
ACTAATTTTTATATTTTTAATAAAAATAAAATTTCACCATATTAACCAA253200.11636458827042193No Hit
ACTAATTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCAA247020.11352440993112015No Hit
ACTAATTTTTTATATTTTTAATAAAAACAAAATTTCACCGTATTAACCA246730.11339113295403319No Hit
ACTAATTTTTTATATTTTTAATAAAAATAAAATTTCACCGTATTAACCA245320.11274313109992065No Hit
ACTAATTTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACC243030.11169070255671659No Hit
ACTAATTTTTATATTTTTAATAAAAACAAAATTTCACCATATTAACCAA239050.10986159094014361No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG220370.10127671531261011No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)