FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721855

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721855
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28324152
Sequences flagged as poor quality0
Sequence length30-51
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG842730.2975305315407148No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA599040.2114944164965645No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA542520.19153971494009775No Hit
AAATAATCCAAATCAATTTCTATCTACTTCAAATTCCTCCCTATACAAA423650.14957199777772695No Hit
AACAATAAACCATAACCAATACTACCAATCAATACTCATCATTAATAAT338630.11955521210308433No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)