FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721857

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721857
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66061116
Sequences flagged as poor quality0
Sequence length30-51
%GC26

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA2961790.4483408969354983No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG2535140.38375676245009244No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA2116160.32033367404813445No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA1678180.25403446105875654No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG1316040.1992155264225327No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA1304280.19743535667789808No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1018970.15424656162333072No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA817150.12369606350579969No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)