FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001745343

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001745343
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12845541
Sequences flagged as poor quality0
Sequence length126
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTGACCTGAGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGT337930.26307183169630616No Hit
GTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGC322690.251207792649605No Hit
GGCGTGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGG250070.1946745567197209No Hit
GGCGTGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGG235110.18302849214369407No Hit
GGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGG232520.1810122282899568No Hit
GTCGGTGACAGGAAGAGGGGTGGTGTGACCTGAGGATGCTGAGGAAGGGC222080.17288489445481509No Hit
GGCAGAGGTTGTGCTGGTTGTAGGAGCAGAGGTTGTGCTGGTGGTGGGAA212990.16580850896042448No Hit
GTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGT205370.15987648943707392No Hit
GTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGTGT197920.15407681155663278No Hit
GTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTGGATACTGAGGAAGCGT192960.15021554950468805No Hit
GTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATGCTGAGGAAGTGT192930.1501921950971158No Hit
GTCGGTGACAAGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGGGC181270.1411151153540361No Hit
GCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGT179980.1401108758284295No Hit
GTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTAGATGCTGAGGAAGGGC178770.13916891472301557No Hit
GTGTGACCTGAGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGT167750.1305900623414771No Hit
GGGTGGTGTCACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGG163050.12693120515515852No Hit
GTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGCGT153580.11955899716485277No Hit
GGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGG147460.11479469802011452No Hit
CAGGAAGAGAGGTGGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGACA144650.11260716851084747No Hit
GGCGTGACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGG142240.11073103110254368No Hit
GTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAAGGC142170.1106765374848751No Hit
GGGGTGGTGTCACCTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGG142020.11055976544701387No Hit
GTGGGAACAGGGCTGGGAGTAGTTCCAGGACCAGAGGTTGTGCTGGCTGT136250.10606793439061851No Hit
GTCGGTGACAGGAAGAGGGGTGGCGTGACCGGTGGATGCCGAGGAAGCGT135560.10553078301645683No Hit
GGGTGGTGTCACCTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGGG133220.10370913922582163No Hit
GTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGCGT132190.10290730456584117No Hit
GGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGG132060.10280610213302811No Hit
GTGACATGAAGAGCGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGT128720.1002059780899847No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)