Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001748685 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21358075 |
Total Bases | 1.6 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 3373453 | 15.79474273781696 | Clontech SMART CDS Primer II A (100% over 26bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 329317 | 1.541885212033388 | No Hit |
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 42108 | 0.19715259919257702 | Clontech SMART CDS Primer II A (100% over 25bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 35135 | 0.16450452580581348 | TruSeq Adapter, Index 1 (100% over 50bp) |
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 21410 | 0.10024311647936436 | No Hit |