Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001748695 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29402482 |
Total Bases | 2.2 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 3780646 | 12.858254619456954 | Clontech SMART CDS Primer II A (100% over 26bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 268276 | 0.9124263727123445 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGC | 82787 | 0.28156466518710904 | TruSeq Adapter, Index 11 (100% over 50bp) |
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 47256 | 0.16072112551586631 | Clontech SMART CDS Primer II A (100% over 25bp) |