Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001748698 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25372558 |
Total Bases | 1.9 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 4264174 | 16.806243974296954 | Clontech SMART CDS Primer II A (100% over 26bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 233237 | 0.9192490564018022 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAG | 45107 | 0.17777868514479306 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 34610 | 0.13640721601661132 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 31521 | 0.12423264536433418 | Clontech SMART CDS Primer II A (100% over 25bp) |