Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001748699 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26156900 |
Total Bases | 1.9 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 3172363 | 12.128207088760519 | Clontech SMART CDS Primer II A (100% over 26bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 295053 | 1.1280121115269774 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTCAACAATCTCGTAT | 101856 | 0.3894039431278171 | TruSeq Adapter, Index 13 (97% over 40bp) |
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 37310 | 0.1426392271255386 | Clontech SMART CDS Primer II A (100% over 25bp) |