Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001748709 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17215718 |
Total Bases | 1.3 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 1784801 | 10.367275997434437 | Clontech SMART CDS Primer II A (100% over 26bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACGATCTCGTAT | 35319 | 0.20515554448556836 | TruSeq Adapter, Index 19 (97% over 40bp) |
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 20901 | 0.12140649608688989 | Clontech SMART CDS Primer II A (100% over 25bp) |