FastQCFastQC Report
Sun 2 Apr 2023
EGAF00001750581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001750581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38062305
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN6810321.7892558004566461No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGT521900.13711728703766102No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)