FastQCFastQC Report
Sun 14 May 2023
EGAF00001750583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001750583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55869941
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7790791.394451087750388No Hit
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT1596280.2857135646518761No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)