FastQCFastQC Report
Wed 14 Sep 2022
EGAF00001750611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001750611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28541117
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT9230883.234239220560289No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN4407891.544399961641305No Hit
CTTATACACATCTCCGCGCCCACGAGACCGAGGCTGATCTCGTATGCCGT455260.159510225195461No Hit
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGCTCTCGTATGCCGT408510.14313034770152827No Hit
CTTATACACATCTCCGAGCCCACGAGCCCGAGGCTGATCTCGTATGCCGT316320.11082957965520411No Hit
TCTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCG303490.106334310601789No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)