FastQCFastQC Report
Tue 26 Sep 2023
EGAF00001750941

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001750941
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59200167
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGT12369472.089431605826382No Hit
CTTATACACATCTCCGCGCCCACGAGACGCTACGCTATCTCGTATGCCGT631890.10673787457390113No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCG607380.1025976835504535No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)