Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001754074 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16704357 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 1499268 | 8.975311052080603 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 63089 | 0.3776799071044758 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGGGTAGATCTCGGTGGTCGCCG | 31173 | 0.1866159828839865 | Illumina Single End PCR Primer 1 (98% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGGGTAGATCTCGGTGGTCGCC | 25371 | 0.15188252980943834 | Illumina Single End PCR Primer 1 (98% over 50bp) |