Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001754241 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18397508 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGTTTCGGAATCTCGTA | 316086 | 1.7180913849854011 | TruSeq Adapter, Index 21 (97% over 40bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTTTCGGAATCTCGTAT | 71315 | 0.3876340208684785 | TruSeq Adapter, Index 21 (97% over 40bp) |
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC | 52152 | 0.2834731747364915 | No Hit |
CAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAA | 18825 | 0.1023236407887416 | No Hit |