Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001754259 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26838372 |
Total Bases | 1.3 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATG | 354927 | 1.322460989809665 | TruSeq Adapter, Index 4 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGC | 304844 | 1.135851310206148 | TruSeq Adapter, Index 4 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATATCGTATG | 39136 | 0.14582106545061674 | TruSeq Adapter, Index 4 (97% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATATCGTATGC | 29658 | 0.11050595766390002 | TruSeq Adapter, Index 4 (98% over 50bp) |