Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001754297 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18075099 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG | 445794 | 2.4663433378705144 | TruSeq Adapter, Index 1 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 252287 | 1.3957710549745812 | TruSeq Adapter, Index 1 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATG | 30351 | 0.1679160927417327 | TruSeq Adapter, Index 1 (97% over 49bp) |
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC | 30142 | 0.16675980585223904 | No Hit |