Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001754696 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9370301 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 55 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 313354 | 3.3441188281998624 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 21413 | 0.22851987358783887 | Illumina Single End PCR Primer 1 (100% over 50bp) |
ACTCCAGTCACAAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAG | 11549 | 0.12325111007639988 | Illumina PCR Primer Index 9 (100% over 40bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGGGTAGATCTCGGTGGTCGCCG | 9420 | 0.10053038851153234 | Illumina Single End PCR Primer 1 (98% over 50bp) |