Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001754705 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24007510 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG | 997611 | 4.155412202265041 | TruSeq Adapter, Index 1 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 679407 | 2.8299769530451093 | TruSeq Adapter, Index 1 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATG | 55864 | 0.23269385288186903 | TruSeq Adapter, Index 1 (97% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC | 33751 | 0.14058517522225336 | TruSeq Adapter, Index 1 (98% over 50bp) |