Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001754903 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19341089 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG | 693619 | 3.5862458416896796 | TruSeq Adapter, Index 1 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 571366 | 2.9541563042287846 | TruSeq Adapter, Index 1 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATG | 35313 | 0.18258020528213276 | TruSeq Adapter, Index 1 (97% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC | 26926 | 0.1392165663474275 | TruSeq Adapter, Index 1 (98% over 50bp) |