Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001755965 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20807936 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTCAACAATCTCGTAT | 317602 | 1.5263503309506528 | TruSeq Adapter, Index 13 (97% over 40bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTCAACAATCTCGTA | 288528 | 1.3866247954626543 | TruSeq Adapter, Index 13 (97% over 40bp) |
CACACGTCTGAACTCCAGTCACAGTCAACAATCTCGTATGCCGTCTTCTG | 22348 | 0.10740132995410982 | TruSeq Adapter, Index 13 (96% over 29bp) |
AAGAGCACACGTCTGAACTCCAGTCACAGTCAACAATCTCGTATGCCGTC | 20944 | 0.10065390435649167 | TruSeq Adapter, Index 13 (97% over 34bp) |