Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001756207 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16497738 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATG | 474531 | 2.876339774580006 | TruSeq Adapter, Index 9 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGC | 373057 | 2.2612615135481 | TruSeq Adapter, Index 9 (100% over 50bp) |
GATCGGAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCC | 35090 | 0.21269582533072112 | TruSeq Adapter, Index 9 (97% over 46bp) |
CACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCCGTCTTCTGCT | 24110 | 0.1461412467575858 | TruSeq Adapter, Index 9 (100% over 50bp) |