Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001756423 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19167116 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGC | 1309254 | 6.830730298705346 | TruSeq Adapter, Index 4 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATG | 660014 | 3.4434705774202023 | TruSeq Adapter, Index 4 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATATCGTATGC | 44230 | 0.2307598075787719 | TruSeq Adapter, Index 4 (98% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATATCGTATG | 25570 | 0.13340556816163684 | TruSeq Adapter, Index 4 (97% over 49bp) |