Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001756623 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18104855 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATG | 315778 | 1.7441619941170476 | TruSeq Adapter, Index 9 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGC | 151682 | 0.8377973753449005 | TruSeq Adapter, Index 9 (100% over 50bp) |
GATCGGAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCC | 26011 | 0.14366864578589555 | TruSeq Adapter, Index 9 (97% over 46bp) |
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC | 18411 | 0.10169095527138991 | No Hit |