Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001756655 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20257748 |
Total Bases | 1 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 660134 | 3.258674162596948 | TruSeq Adapter, Index 1 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG | 624899 | 3.0847407125411967 | TruSeq Adapter, Index 1 (100% over 49bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATG | 41963 | 0.2071454339347098 | TruSeq Adapter, Index 1 (97% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC | 41481 | 0.2047660973964135 | TruSeq Adapter, Index 1 (98% over 50bp) |