Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001756895 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17226286 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGC | 708685 | 4.1139744225772175 | TruSeq Adapter, Index 4 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATG | 492208 | 2.857307721467065 | TruSeq Adapter, Index 4 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATATCGTATGC | 26515 | 0.15392174494258368 | TruSeq Adapter, Index 4 (98% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATATCGTATG | 20748 | 0.1204438379810947 | TruSeq Adapter, Index 4 (97% over 49bp) |