FastQCFastQC Report
Thu 26 Jan 2023
EGAF00001757736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001757736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139510866
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG2124950.15231430073697627No Hit
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGAC1581740.11337754867065336No Hit
GGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTT1438460.10310738089748508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)