FastQCFastQC Report
Mon 23 Jan 2023
EGAF00001757760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001757760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences180358294
Sequences flagged as poor quality0
Sequence length100
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG2614630.1449686588851855No Hit
CTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCT1898780.10527821914305753No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)