FastQCFastQC Report
Fri 15 Sep 2023
EGAF00001764439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001764439
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences57356625
Sequences flagged as poor quality0
Sequence length90
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN644400.11234970676883448No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN629690.10978505098582769No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)