FastQCFastQC Report
Thu 14 Sep 2023
EGAF00001765251

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001765251
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences46517600
Sequences flagged as poor quality0
Sequence length90
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN820180.1763160610177653No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN758800.16312105525650508No Hit
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN475950.10231611261114072No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)