FastQCFastQC Report
Fri 24 Mar 2023
EGAF00001765265

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001765265
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences60900529
Sequences flagged as poor quality0
Sequence length90
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1214090.19935623219299128No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1110390.18232846548837037No Hit
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN700680.11505318779743276No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)