FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001775043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001775043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11291
Sequences flagged as poor quality0
Sequence length40-730
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTCCAGGCACTGT146512.97493578956691No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCGAGCACTGTCAG8647.652112301833319No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAG8417.4484102382428485No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAG7977.058719333982818No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTAGCACGGTGAG4974.401735895846249No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTGTGACCGTGAG4363.86148259675848No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTGGAAAGGGAAG4123.6489239217075546No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAA3763.3300859091311663No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTGT3433.037817730936144No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAG3322.9403950048711365No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCCAAGACAGAGAG2562.267292533876539No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCGAGCACCAGGAG2302.037020635904703No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAG2101.8598884066955983No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAG2071.8333185723142327No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAG1821.611903285802852No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTGGTCAATATCT1621.4347710565937473No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTAGGATGGAGAG1561.381631387831016No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCCAGTACGGTCAG1451.2842086617660085No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTACAACTGTGAG1301.15135948985918No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTCAGGTCCTCTCCAGGCACTGTC1221.0805065981755382No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGAG1171.0362235408732619No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAG950.8413780887432468No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCCAGCACTGAGAG790.6996723053759633No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAAAGGGAAG740.655389248073687No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTACAACGGTTAA680.6022495793109557No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAG580.5136834647064034No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTGTCACAGTGAG460.40740412718094055No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCCAAGACAGAGAG450.39854751572048536No Hit
ACGCGAGTATCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAG390.345407846957754No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTCAGGTCCTCGAGCACTGTCAGC380.33655123549729876No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTGGTCAATATCT350.3099814011159331No Hit
ACGCGAGTATCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTGT340.30112478965547784No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGAG300.2656983438136569No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTCTGCCCATCCC290.2568417323532017No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTCAGGTCCTCTGTGACCGTGAGC230.20370206359047027No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTCAGGTCCTCGAGCACCAGGAGC190.16827561774864938No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTCAGGTCCTCTAGGATGGAGAGT190.16827561774864938No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCTACAACAGTGAG190.16827561774864938No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTGGAAGGGAAGA160.14170578336728368No Hit
ACGCGAGTATCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAG150.13284917190682846No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTCAGGTCCTCTAGCACGGTGAGC150.13284917190682846No Hit
ACGCGAGTATCGGGTGGGAACACGTTTTTCAGGTCCTCTAGGATGGAGAG150.13284917190682846No Hit
ACGCGAGTATCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAG150.13284917190682846No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCCAGCACGGTCAG150.13284917190682846No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTCAGGTCCTCTGGTCAATATCC140.12399256044637322No Hit
CTGCGTCACGCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACGGTCAG140.12399256044637322No Hit
TACTCTCGTGCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTGT130.11513594898591799No Hit
ACGCGAGTATCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAG130.11513594898591799No Hit
TACTCTCGTGCGGGTGGGAACACCTTGTTTCAGGTCCTCTACAACTGTGA130.11513594898591799No Hit
ACGCGAGTATCGGGTGGGAACACGTTTTTCAGGTCCTCTACAACTGTGAG130.11513594898591799No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)