FastQCFastQC Report
Thu 16 May 2024
EGAF00001778106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001778106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71016381
Total Bases5.3 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3002690.42281653299117No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN797300.11226987193278688No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)