FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001793686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17619730
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT490160.27818814476725806No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT442830.25132621214967543No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT248200.14086481461407185No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)