FastQCFastQC Report
Sun 2 Apr 2023
EGAF00001793690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27010033
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1219680.45156553492548496No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1073890.3975892957998237No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT639930.23692307225244782No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)