FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001793703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25053128
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT782290.3122524261241949No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT707810.2825236034398579No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT415690.16592339287932428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)