FastQCFastQC Report
Wed 14 Sep 2022
EGAF00001793704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25053128
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT602850.24062863527460526No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT521470.20814566548336796No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT293810.11727477702584684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)