FastQCFastQC Report
Thu 5 Jan 2023
EGAF00001793707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22728311
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT821880.36161068017768677No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT765320.33672541703604814No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT494800.21770205449934224No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)