FastQCFastQC Report
Sun 2 Apr 2023
EGAF00001793712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28266784
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1049090.3711387896125714No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT905790.320443245329925No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT545250.19289424647671274No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)