FastQCFastQC Report
Mon 3 Apr 2023
EGAF00001793729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29499274
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1011730.3429677625286643No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT879300.29807513228969634No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT557140.18886566496517848No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)