FastQCFastQC Report
Wed 22 Feb 2023
EGAF00001793736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26725748
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT587370.21977682345878588No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT481290.18008476320288586No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT301840.11293977627866579No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)