FastQCFastQC Report
Tue 26 Sep 2023
EGAF00001793741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30603627
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1070440.34977553477566564No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT918530.30013762747794565No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT598660.19561733646799445No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)