FastQCFastQC Report
Mon 3 Apr 2023
EGAF00001793744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28652006
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT768240.26812782323164386No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT615470.21480869437204503No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT387970.1354076220701615No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)